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Default parameters of Curvep

Source: R/rcurvep_onerun.R
curvep_defaults.Rd

Default parameters of Curvep

Usage

curvep_defaults()

Value

A list of parameters with class as curvep_config.

  • TRSH: (default = 15) base(zero-)line threshold

  • RNGE: (default = -1000000, decreasing) target range of responses

  • MXDV: (default = 5) maximum allowed deviation from monotonicity

  • CARR: (default = 0) carryover detection threshold (analysis skipped if set to 0)

  • BSFT: (default = 3) for baseline shift issue, min.#points to detect baseline shift (analysis skipped if set to 0)

  • USHP: (default = 4) for u-shape curves, min.#points to avoid flattening (analysis skipped if set to 0)

  • TrustHi: (default = TRUE)for equal sets of corrections, trusts those retaining measurements at high concentrations

  • StrictImp: (default = TRUE) prevents extrapolating over concentration-range boundaries; used for POD, ECxx etc.

  • DUMV: (default = -999) dummy value for inactive (not suggested to modify)

  • TLOG: (default = -24) denominator for calculation wAUC (not suggested to modify)

  • seed: (default = NA) can be set when bootstrapping samples

See also

curvep()

Examples


# display all default settings
curvep_defaults()
#> 
#> curvep configuration parameters
#>          TRSH:    [15]
#>          RNGE:    [-1e+06]
#>          MXDV:    [5]
#>          CARR:    [0]
#>          BSFT:    [3]
#>          USHP:    [4]
#>       TrustHi:    [TRUE]
#>     StrictImp:    [TRUE]
#>          DUMV:    [-999]
#>          TLOG:    [-24]
#>          seed:    [NA]
#> 

# customize settings
custom_settings <- curvep_defaults()
custom_settings$TRSH <- 30
custom_settings
#> 
#> curvep configuration parameters
#>          TRSH:    [30]
#>          RNGE:    [-1e+06]
#>          MXDV:    [5]
#>          CARR:    [0]
#>          BSFT:    [3]
#>          USHP:    [4]
#>       TrustHi:    [TRUE]
#>     StrictImp:    [TRUE]
#>          DUMV:    [-999]
#>          TLOG:    [-24]
#>          seed:    [NA]
#>